miRBase entry: ssc-mir-218b

Stem-loop ssc-mir-218b


Accession
MI0017989
Description
Sus scrofa ssc-mir-218b precursor miRNA
Gene family
MIPF0000026; mir-218

Literature search
8 open access papers mention ssc-mir-218b
(34 sentences)

Sequence

8 reads, 23 reads per million, 5 experiments
gggcuuuccuUUGUGCUUGAUCUAACCAUGUGguggaacgauggaaacggaacaugguucugucaagcaccgcggaaagcuccg
(((((((((...(((((((((..((((((((..((............))..))))))))..)))))))))...))))))).)).

Structure
-  -       uUU         CU        Gg  gaacg 
 gg gcuuucc   GUGCUUGAU  AACCAUGU  ug     a
 || |||||||   |||||||||  ||||||||  ||      
 cc cgaaagg   cacgaacug  uugguaca  gc     u
g  u       cgc         uc        ag  aaagg 


Annotation confidence Not enough data
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Genome context
chr16: 59686628-59686711 [+]

Database links

Mature ssc-miR-218b

Accession MIMAT0020589
Description Sus scrofa ssc-miR-218b mature miRNA
Sequence 11 - UUGUGCUUGAUCUAACCAUGUG - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328