Stem-loop osa-MIR2863c

Accession

MI0018060

Description

Oryza sativa osa-MIR2863c precursor miRNA

Gene family

MIPF0000925; MIR2863

Literature search

4 open access papers mention osa-MIR2863c
(4 sentences)

Sequence

215 reads, 154 reads per million, 2 experiments

ggguauuucuugacccacuuuaguucaacuaaaaugaacuaaguuucacuuuuagagagucuaaagugaaauuuaguucauUUAGUAGGACUAGAAUGGGCCAAAgaauaccca
((((((((.(((.((((.((((((((.((((((.((((((((((((((((((.(((...))))))))))))))))))))))))))).)))))))).)))).))).)))))))).

Structure

-        c   a    c        a      a                  u   g 
 ggguauuu uug ccca uuuaguuc acuaaa ugaacuaaguuucacuuu aga  
 |||||||| ||| |||| |||||||| |||||| |||||||||||||||||| ||| a
 cccauaag AAC GGGU AGAUCAGG UGAUUu acuugauuuaaagugaaa ucu  
a        A   C    A        A      -                  -   g 

Annotation confidence Not enough data

Genome context

Chr2: 29869493-29869606 [+]

Mature osa-miR2863c

• Accession: MIMAT0021093
• Description: Oryza sativa osa-miR2863c mature miRNA
• Sequence: 82 - UUAGUAGGACUAGAAUGGGCCAAA - 105
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 21525786
   Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
   "Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D"
   "RNA Biol (2011) 8:538-547


2. PubMed ID: 22158467
   Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage
   "Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ"
   "Plant Cell (2011) 23:4185-4207