Stem-loop osa-MIR5148b

Accession

MI0018062

Description

Oryza sativa osa-MIR5148b precursor miRNA

Gene family

MIPF0001298; MIR5148

Sequence

51 reads, 46 reads per million, 2 experiments

uacgauaugacguuuguaccccucacaaguauaaguauaauguaugucaaUGAGGGGUAGAAAUGUCAUAUCAUgugu
...((((((((((((.(((((((((...(((((.......))))).....))))))))).))))))))))))......

Structure

---uac            g         --caa     ag 
      gauaugacguuu uaccccuca     guaua  u
      |||||||||||| |||||||||     |||||  a
      CUAUACUGUAAA AUGGGGAGU     uaugu  u
ugugUA            G         aacug     aa 

Annotation confidence Not enough data

Genome context

Chr6: 27436650-27436727 [+]

Mature osa-miR5148b

• Accession: MIMAT0021095
• Description: Oryza sativa osa-miR5148b mature miRNA
• Sequence: 51 - UGAGGGGUAGAAAUGUCAUAUCAU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21525786
   Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus
   "Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D"
   "RNA Biol (2011) 8:538-547