Accession
MI0018097
Description
Brachypodium distachyon
bdi-MIR169k precursor miRNA
Gene family
MIPF0000012;
MIR169_1
Literature search
3 open access papers mention bdi-MIR169k
(27 sentences)
(27 sentences)
Sequence
ucuuugcauggaaguaggaggccaucuuugaUAGCCAAGGAUGAUUUGCCUGUaaaaccgauugucgucgccucucggugccguuccaggcacucgaagggagggcggcagcaacagguucuauGGGCAAGUCAGCCUGGCUACCcgaguaccucuuacccauauuccaugcca
.....((((((((((((((((....(((.(.((((((.((.(((((((((((((.((((..((((.((((((((((((((((......))))))....)))).)))))).))))..)))).))))))))))))).)))))))).).)))..)))))))).....))))))))..
.....((((((((((((((((....(((.(.((((((.((.(((((((((((((.((((..((((.((((((((((((((((......))))))....)))).)))))).))))..)))).))))))))))))).)))))))).).)))..)))))))).....))))))))..
Structure
ucuuu ----- ccau u a A A a ga c - ---- gu
gcauggaa guaggagg cuu g UAGCCA GG UGAUUUGCCUGUa aacc uugu gucgcc ucuc ggugcc u
|||||||| |||||||| ||| | |||||| || ||||||||||||| |||| |||| |||||| |||| ||||||
cguaccuu cauucucc gag C AUCGGU CC ACUGAACGGGuau uugg aacg cggcgg aggg ucacgg c
---ac auacc --au c C - G c ac a g aagc ac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
1: 1175425-1175598 [+]
Database links
Mature bdi-miR169k-5p
| Accession | MIMAT0020672 |
| Description | Brachypodium distachyon bdi-miR169k-5p mature miRNA |
| Sequence | 32 - UAGCCAAGGAUGAUUUGCCUGU - 53 |
| Evidence |
experimental
Illumina [2] |
Mature bdi-miR169k-3p
| Accession | MIMAT0027052 |
| Description | Brachypodium distachyon bdi-miR169k-3p mature miRNA |
| Sequence | 125 - GGGCAAGUCAGCCUGGCUACC - 145 |
| Evidence |
experimental
Illumina [2] |
References
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