Stem-loop ssp-MIR437a

Accession

MI0018182

Description

Saccharum sp. ssp-MIR437a precursor miRNA

Gene family

MIPF0000746; MIR437

Sequence

aagucaaaccucucuaacuuugaucaaguuuauagaaaaaugcaccaaaaucuagaauaucaaacuaguuccauuaaauucuccaugaaauauauuuugauaaugcauuuauugaacuuguagaugauaauauauuuuuucuaaaaacuugaucAAAGUUAGAGAAGUUUGACUU
(((((((((.(((((((((((((((((((((.((((((((.........(((((.((..((((....((...(((((((((.....)))......))))))...)).....))))..)).)))))..........)))))))).))))))))))))))))))))).)))))))))

Structure

         c                     a        -ugcaccaaa     g  ua    -acua  ucc      ------   u 
aagucaaac ucucuaacuuugaucaaguuu uagaaaaa          aucua aa  ucaa     gu   auuaaa      uuc c
||||||||| ||||||||||||||||||||| ||||||||          ||||| ||  ||||     ||   ||||||      ||| c
UUCAGUUUG AGAGAUUGAAAcuaguucaaa aucuuuuu          uagau uu  aguu     cg   uaguuu      aag a
         A                     a        uauauaauag     g  ca    auuua  uaa      uauaua   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssp-miR437a

• Accession: MIMAT0020280
• Description: Saccharum sp. ssp-miR437a mature miRNA
• Sequence: 155 - AAAGUUAGAGAAGUUUGACUU - 175
• Evidence: not_experimental

References

1. PubMed ID: 21092324
   Identification and expression analysis of microRNAs and targets in the biofuel crop sugarcane
   Zanca AS, Vicentini R, Ortiz-Morea FA, Del Bem LE, da Silva MJ, Vincentz M, Nogueira FT
   BMC Plant Biol (2010) 10:260