Stem-loop ssp-MIR437c

Accession

MI0018184

Description

Saccharum sp. ssp-MIR437c precursor miRNA

Gene family

MIPF0000746; MIR437

Sequence

aagucauuuuuuuuauaucuuugaucaaauuuauggaaaaauguaucaacaucuacaauaucaauuuuauuuucauaaaauucuccaugaaauauuucuuaauagugcauuuauucgaacuuguagauguuaauauauuuuucuaaaacuuuggucAAAGUUAGAGAAGUCUGACUU
((((((.((((((((...(((((((((((.((.(((((((((((((.(((((((((((..((((((((((....))))))))....(((...((((....))))...)))......))..))))))))))).))))))))))))).)).))))))))))).))))))))..))))))

Structure

      -u        uau           u  a             c           ua  ----------------------------------        u 
aaguca  uuuuuuua   cuuugaucaaa uu uggaaaaauguau aacaucuacaa  uc                                  aauuuuau u
||||||  ||||||||   ||||||||||| || ||||||||||||| |||||||||||  ||                                  ||||||||  
UUCAGU  GAAGAGAU   GAAAcugguuu aa aucuuuuuauaua uuguagauguu  ag                                  uuaaaaua u
      CU        --U           c  a             a           ca  cuuauuuacgugauaauucuuuauaaaguaccuc        c 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssp-miR437c

• Accession: MIMAT0020282
• Description: Saccharum sp. ssp-miR437c mature miRNA
• Sequence: 157 - AAAGUUAGAGAAGUCUGACUU - 177
• Evidence: not_experimental

References

1. PubMed ID: 21092324
   Identification and expression analysis of microRNAs and targets in the biofuel crop sugarcane
   Zanca AS, Vicentini R, Ortiz-Morea FA, Del Bem LE, da Silva MJ, Vincentz M, Nogueira FT
   BMC Plant Biol (2010) 10:260