miRBase entry: ssp-MIR444a

Stem-loop ssp-MIR444a


Accession
MI0018185
Description
Saccharum sp. ssp-MIR444a precursor miRNA
Gene family
MIPF0000402; MIR444


Sequence

caagcaugaggcaggaacugcauuacuugcaagaaagucacaaaaucaauugcaggacauacuugugguuuucuugcaaguugUGCAGUUGUUGCCUCAAGCUUg
(((((.((((((((.((((((((.(((((((((((((((((((...................))))))))))))))))))).)))))))).)))))))).)))))

Structure
     a        g        u                   aaucaauu 
caagc ugaggcag aacugcau acuugcaagaaagucacaa        g
||||| |||||||| |||||||| |||||||||||||||||||        c
gUUCG ACUCCGUU UUGACGUg ugaacguucuuuugguguu        a
     A        G        u                   cauacagg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ssp-miR444a

Accession MIMAT0020283
Description Saccharum sp. ssp-miR444a mature miRNA
Sequence 84 - UGCAGUUGUUGCCUCAAGCUU - 104
Evidence not_experimental

References

  1. PubMed ID: 21092324
    Identification and expression analysis of microRNAs and targets in the biofuel crop sugarcane
    Zanca AS, Vicentini R, Ortiz-Morea FA, Del Bem LE, da Silva MJ, Vincentz M, Nogueira FT
    BMC Plant Biol (2010) 10:260