Stem-loop ssp-MIR444b

Accession

MI0018186

Description

Saccharum sp. ssp-MIR444b precursor miRNA

Gene family

MIPF0000402; MIR444

Sequence

caagcaugaggcaggaacugcauuacuugcaagaaagucacaaaaucaauugcaggaucauacUUGUGGCUUUCUUGCAAGUUGUGCAGUUGUUGCCUCAAGCUUg
(((((.((((((((.((((((((.(((((((((((((((((((.....(((....))).....))))))))))))))))))).)))))))).)))))))).)))))

Structure

     a        g        u                   aauca   g 
caagc ugaggcag aacugcau acuugcaagaaagucacaa     auu c
||||| |||||||| |||||||| |||||||||||||||||||     |||  
gUUCG ACUCCGUU UUGACGUG UGAACGUUCUUUCGGUGUU     uag a
     A        G        U                   cauac   g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssp-miR444b.1

• Accession: MIMAT0020284
• Description: Saccharum sp. ssp-miR444b.1 mature miRNA
• Sequence: 64 - UUGUGGCUUUCUUGCAAGUUG - 84
• Evidence: not_experimental

Mature ssp-miR444b.2

• Accession: MIMAT0020285
• Description: Saccharum sp. ssp-miR444b.2 mature miRNA
• Sequence: 85 - UGCAGUUGUUGCCUCAAGCUU - 105
• Evidence: not_experimental

References

1. PubMed ID: 21092324
   Identification and expression analysis of microRNAs and targets in the biofuel crop sugarcane
   Zanca AS, Vicentini R, Ortiz-Morea FA, Del Bem LE, da Silva MJ, Vincentz M, Nogueira FT
   BMC Plant Biol (2010) 10:260