Stem-loop ssp-MIR444c

Accession

MI0018187

Description

Saccharum sp. ssp-MIR444c precursor miRNA

Gene family

MIPF0000402; MIR444

Sequence

ggugacaagcuagaggcagcaacugcauaucuugcaagaaaauugguuuucgaaccauaccgauaauuuucuugcaaguugUGCAGUUGUUGUCUCAAGCUUgcugcc
((((.((((((.(((((((((((((((((.(((((((((((((((....(((........)))))))))))))))))).))))))))))))))))).)))))).))))

Structure

    a      a                 u               guuu   aac 
ggug caagcu gaggcagcaacugcaua cuugcaagaaaauug    ucg   c
|||| |||||| ||||||||||||||||| |||||||||||||||    |||    
ccgu gUUCGA CUCUGUUGUUGACGUgu gaacguucuuuuaau    agc   a
    c      A                 u               ----   cau 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssp-miR444c-3p

• Accession: MIMAT0020286
• Description: Saccharum sp. ssp-miR444c-3p mature miRNA
• Sequence: 82 - UGCAGUUGUUGUCUCAAGCUU - 102
• Evidence: not_experimental

References

1. PubMed ID: 21092324
   Identification and expression analysis of microRNAs and targets in the biofuel crop sugarcane
   Zanca AS, Vicentini R, Ortiz-Morea FA, Del Bem LE, da Silva MJ, Vincentz M, Nogueira FT
   BMC Plant Biol (2010) 10:260