Stem-loop sequence mtr-MIR5204

AccessionMI0018239 (change log)
DescriptionMedicago truncatula miR5204 stem-loop
Gene family MIPF0001295; MIR862_2
Literature search

1 open access papers mention mtr-MIR5204
(1 sentences)

Stem-loop 
   aacuuu   u     cu     g              ucaua 
5'       uca guucc  caaag cuuccaguauucgg     u
         ||| |||||  ||||| ||||||||||||||      
3'       agu caagg  guuuu gaaggucguaaguu     a
   uucgau   u     au     g              cauua
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JCVI_Mt3.5.2) Overlapping transcripts
chr7: 23966861-23966946 [+]
intergenic
Clustered miRNAs
< 10kb from mtr-MIR5204
mtr-MIR5206bchr7: 23959036-23959156 [-]
mtr-MIR5037cchr7: 23961112-23961230 [-]
mtr-MIR5204chr7: 23966861-23966946 [+]
Database links

Mature sequence mtr-miR5204

Accession MIMAT0021132
Sequence

56 -  

gcuggaagguuuuguaggaac

 - 76

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:21571671 "Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis" Devers EA, Branscheid A, May P, Krajinski F Plant Physiol. 156:1990-2010(2011).