Stem-loop mtr-MIR5208b

Accession

MI0018247

Description

Medicago truncatula mtr-MIR5208b precursor miRNA

Gene family

MIPF0001326; MIR5208

Sequence

uuaugcuaguAACAUGGAUGUUGUGAGUUUGUUcauagauucauuccuuuuuguuuuuagcgaauuuga
....(((((.((((.(((.(..(((((((((....))))))))).).))).)))).)))))........

Structure

----uuau     u    U   U UU         U 
        gcuag AACA GGA G  GUGAGUUUG U
        ||||| |||| ||| |  |||||||||  
        cgauu uugu uuu c  uacuuagau c
aguuuaag     u    u   c -u         a 

Annotation confidence Not enough data

Genome context

chr5: 3497460-3497528 [+]

Mature mtr-miR5208b

• Accession: MIMAT0021140
• Description: Medicago truncatula mtr-miR5208b mature miRNA
• Sequence: 11 - AACAUGGAUGUUGUGAGUUUGUU - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010