miRBase entry: mtr-MIR5208c

Stem-loop mtr-MIR5208c


Accession
MI0018248
Description
Medicago truncatula mtr-MIR5208c precursor miRNA
Gene family
MIPF0001326; MIR5208


Sequence

uuaugauauuAACAUGGAUGUUGUGAGUUUGUUcacaaauucauacuuuuuguuuuuagcgaauuugua
......((..((((.(((.((.(((((((((....)))))))))))))).))))..))...........

Structure
-----uuauga  uu    U   U  U         U 
           ua  AACA GGA GU GUGAGUUUG U
           ||  |||| ||| || |||||||||  
           au  uugu uuu ca uacuuaaac c
auguuuaagcg  uu    u   -  -         a 


Annotation confidence Not enough data
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Genome context
chr4: 42906587-42906655 [-]

Database links

Mature mtr-miR5208c

Accession MIMAT0021141
Description Medicago truncatula mtr-miR5208c mature miRNA
Sequence 11 - AACAUGGAUGUUGUGAGUUUGUU - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010