Stem-loop mtr-MIR5215

Accession

MI0018256

Description

Medicago truncatula mtr-MIR5215 precursor miRNA

Sequence

aaucauaagaacacaguaaacgcuuccuuucuugcaaacugcuuauuuugaauaAGGAGGAUGAGCUACCUGCUUcuaaucaucgu
......(((((...(((....)))....)))))(((....(((((((((........)))))))))....))).............

Structure

aaucauaagaacacaguaaacgcuuccuuucuu   aacu         gaa 
                                 gca    gcuuauuuu   u
                                 |||    |||||||||    
                                 CGU    CGAGUAGGA   a
--------------------ugcuacuaaucUU   CCAU         GGA 

Annotation confidence Not enough data

Genome context

chr8: 18805675-18805760 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR5215

Mature mtr-miR5215

• Accession: MIMAT0021150
• Description: Medicago truncatula mtr-miR5215 mature miRNA
• Sequence: 55 - AGGAGGAUGAGCUACCUGCUU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010