miRBase entry: mtr-MIR5218

Stem-loop mtr-MIR5218


Accession
MI0018282
Description
Medicago truncatula mtr-MIR5218 precursor miRNA


Sequence

augUGAGACUUGGUAGUAAGAUGAUuggagacauuggaagucuugagauagaggucuuuagcaauaaccaa
.((((((((((.....((((((..((.((....)).)).))))))......)))))))..)))........

Structure
-------a   --       -GGUAG      GA  g  g 
        ugU  GAGACUU      UAAGAU  Uu ga a
        |||  |||||||      ||||||  || ||  
        acg  uucugga      guucug  ag uu c
aaccaaua   au       gauaga      -a  g  a 


Annotation confidence Not enough data
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Genome context
chr3: 13900537-13900607 [+]

Database links

Mature mtr-miR5218

Accession MIMAT0021176
Description Medicago truncatula mtr-miR5218 mature miRNA
Sequence 4 - UGAGACUUGGUAGUAAGAUGAU - 25
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010