miRBase entry: mtr-MIR5222

Stem-loop mtr-MIR5222


Accession
MI0018285
Description
Medicago truncatula mtr-MIR5222 precursor miRNA


Sequence

gcucaguccaUUACAGGAGAAGAAUGUAUGGCuuuugaugauaaaagcuugacuaauuugucugguagaguucaccauauaaguuuuuccuuuauuaauuuguaua
..............((((((((..(((((((.......(((.....(((.(((......))).))).....))))))))))..))))))))...............

Structure
-gcucaguccaUUAC        AA       Cuuuuga   uaaaa   u   ua 
               AGGAGAAG  UGUAUGG       uga     gcu gac  a
               ||||||||  |||||||       |||     ||| |||   
               uccuuuuu  auauacc       acu     ugg cug  u
auauguuuaauuauu        ga       -------   ugaga   u   uu 


Annotation confidence Not enough data
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Genome context
chr6: 10882021-10882126 [+]

Database links

Mature mtr-miR5222

Accession MIMAT0021179
Description Medicago truncatula mtr-miR5222 mature miRNA
Sequence 11 - UUACAGGAGAAGAAUGUAUGGC - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010