miRBase entry: mtr-MIR2592az

Stem-loop mtr-MIR2592az


Accession
MI0018303
Description
Medicago truncatula mtr-MIR2592az precursor miRNA
Gene family
MIPF0000815; MIR2592

Literature search
1 open access papers mention mtr-MIR2592az
(2 sentences)

Sequence

accugccaaacaacaggacucgagcauuucgcucggcauucauguuuuuccuuugaaaagauuaaauucuuguuAGGCUGGUUUAGAUGAAGGUAuuaagugucaaggaaugaaccucauuucguuggcacuugaauaccaucaucuaaagcacgccuaacaaaaauuuaaucuuuucaaaggaaaacaugaaugucgggugaaaugcuugaguccuguuguuugacagguuu
(((((.((((((((((((((((((((((((((((((((((((((((((.(((((((((((((((((((.(((((((((((.(((((((((.((((((((((((((((((((((...))))))).)))))))))).))))).))))))))).)).))))))))).))))))))))))))))))))))))))))))))))))))))))))))))))))))))))))).)))))..

Structure
--     c                                          u                   c         -  G         A     -          -       a 
  accug caaacaacaggacucgagcauuucgcucggcauucauguuuu ccuuugaaaagauuaaauu uuguuAGGC UG UUUAGAUGA GGUAu uaagugucaa ggaauga  
  ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| || ||||||||| ||||| |||||||||| ||||||| c
  uggac guuuguuguccugaguucguaaagugggcuguaaguacaaaa ggaaacuuuucuaauuuaa aacaauccg ac aaaucuacu ccaua guucacgguu cuuuacu  
uu     a                                          -                   a         c  g         a     a          g       c 


Annotation confidence Not enough data
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Genome context
chr5: 11099732-11099964 [+]

Database links

Mature mtr-miR2592az

Accession MIMAT0021197
Description Medicago truncatula mtr-miR2592az mature miRNA
Sequence 75 - AGGCUGGUUUAGAUGAAGGUA - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010