miRBase entry: mtr-MIR2592bg

Stem-loop mtr-MIR2592bg


Accession
MI0018310
Description
Medicago truncatula mtr-MIR2592bg precursor miRNA
Gene family
MIPF0000815; MIR2592

Literature search
1 open access papers mention mtr-MIR2592bg
(2 sentences)

Sequence

uaaauucauguuAGGCUGGUUUAGAUGAAGGUAuuaagugucaaggaaugaaccucauuucguuggcaauugaauaucaucaucuaaagcaagccuaacaaaaauuu
.(((((..((((((((((.(((((((((.((((((...(((((((((((((...))))))).))))))....)))))).))))))))).).)))))))))..)))))

Structure
u     ca         - G         A      -aag      -       a 
 aaauu  uguuAGGCU G UUUAGAUGA GGUAuu    ugucaa ggaauga  
 |||||  ||||||||| | ||||||||| ||||||    |||||| ||||||| c
 uuuaa  acaauccga c aaaucuacu cuauaa    acgguu cuuuacu  
-     aa         a g         a      guua      g       c 


Annotation confidence Not enough data
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Genome context
chr7: 31785438-31785544 [+]

Database links

Mature mtr-miR2592bg

Accession MIMAT0021204
Description Medicago truncatula mtr-miR2592bg mature miRNA
Sequence 13 - AGGCUGGUUUAGAUGAAGGUA - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010