miRBase entry: mtr-MIR5229a

Stem-loop mtr-MIR5229a


Accession
MI0018318
Description
Medicago truncatula mtr-MIR5229a precursor miRNA
Gene family
MIPF0001323; MIR5229


Sequence

cuuuuuuuguUUAGCAGGAAGAGUGACUAUGgaggcugacaaaaggguuggucacguuagucacucuuccuguuaaccaauuaaauaag
.(((..(((.(((((((((((((((((((..(.(((((((......))))))).)..))))))))))))))))))).)))..)))....

Structure
---c   uu   u                   UG a       aa 
    uuu  uug UUAGCAGGAAGAGUGACUA  g ggcugac  a
    |||  ||| |||||||||||||||||||  | |||||||   
    aaa  aac aauuguccuucucacugau  c cugguug  a
gaau   uu   c                   ug a       gg 


Annotation confidence Not enough data
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Genome context
chr5: 11248880-11248968 [+]

Database links

Mature mtr-miR5229a

Accession MIMAT0021213
Description Medicago truncatula mtr-miR5229a mature miRNA
Sequence 11 - UUAGCAGGAAGAGUGACUAUG - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010