Stem-loop mtr-MIR5230

Accession

MI0018320

Description

Medicago truncatula mtr-MIR5230 precursor miRNA

Sequence

uuugacuaucCAAAUCUUGAAUCGAUUGGCAaggagauuguagacaaauguggaggguugccuuuagccgugaaaacauuggggaaucucuugcaaagaaaauuuucucagggugaaugguuuaagauauuggaaacugauaug
........(((((((((((((((.(((.((.((((((((.(.....(((((..(.(((((....))))).)....)))))..).))))))))....((((....))))....)).))))))))))))).)))))..........

Structure

--uuugacua     -          G   G  -------------------A        g agaca     --gg g     c 
          ucCAA AUCUUGAAUC AUU GC                    aggagauu u     aaugu    a gguug c
          ||||| |||||||||| ||| ||                    |||||||| |     |||||    | |||||  
          agguu uagaauuugg uaa ug                    uucucuaa g     uuaca    u ccgau u
guauagucaa     a          -   g  ggacucuuuuaaaagaaacg        g ---gg     aaag g     u 

Annotation confidence Not enough data

Genome context

chr7: 4957135-4957278 [+]

Mature mtr-miR5230

• Accession: MIMAT0021215
• Description: Medicago truncatula mtr-miR5230 mature miRNA
• Sequence: 11 - CAAAUCUUGAAUCGAUUGGCA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010