miRBase entry: mtr-MIR5238

Stem-loop mtr-MIR5238


Accession
MI0018333
Description
Medicago truncatula mtr-MIR5238 precursor miRNA


Sequence

agauacucgagUGUAGAAAAAACAAAGGGCAAaugauacuuccaguuuucuaugaaguugauccuuuucauguucgacaccaauuaggaa
..........((((.(((.....((((((((......(((((.((....))..))))))).)))))).....))).))))..........

Structure
agauacucga    A   AAAAC      -  Aaugau     -c  u 
          gUGU GAA     AAAGGG CA      acuuc  ag u
          |||| |||     |||||| ||      |||||  ||  
          caca cuu     uuuccu gu      ugaag  uc u
aaggauuaac    g   guacu      a  ------     ua  u 


Annotation confidence Not enough data
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Genome context
AC159090.17: 91612-91701 [+]

Database links

Mature mtr-miR5238

Accession MIMAT0021228
Description Medicago truncatula mtr-miR5238 mature miRNA
Sequence 12 - UGUAGAAAAAACAAAGGGCAA - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010