miRBase entry: mtr-MIR5244

Stem-loop mtr-MIR5244


Accession
MI0018345
Description
Medicago truncatula mtr-MIR5244 precursor miRNA


Sequence

auaacaacgcgccaacaaaaaguugcagagguggcacacacauuuccuauucaggaauuagaaccucUAUCUCAUGAAGAUUGUUGGUcuuuacucuca
..........((((((((....((.(((((((((.........(((((....))))).........))))))).))))..))))))))...........

Structure
-auaacaacgc        aaag  g  -       cacacacau     a 
           gccaacaa    uu ca gaggugg         uuccu u
           ||||||||    || || |||||||         |||||  
           UGGUUGUU    AA GU CUCUAUc         aagga u
acucucauuuc        --AG  -  A       uccaagauu     c 


Annotation confidence Not enough data
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Genome context
chr3: 10491069-10491167 [+]

Database links

Mature mtr-miR5244

Accession MIMAT0021240
Description Medicago truncatula mtr-miR5244 mature miRNA
Sequence 68 - UAUCUCAUGAAGAUUGUUGGU - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010