miRBase entry: mtr-MIR160f

Stem-loop mtr-MIR160f


Accession
MI0018371
Description
Medicago truncatula mtr-MIR160f precursor miRNA
Gene family
MIPF0000032; MIR160

Literature search
5 open access papers mention mtr-MIR160f
(16 sentences)

Sequence

aauguuguguuugccuggcucccugcaugccauauaagaggcuucucaaaaugguugacgacccuuuuacuugGCGUGAAGGGAGUCAAGCAGGcagccuaauc
.......(((((((.(((((((((.(((((((..(((((((.((.((((.....)))).)).)))))))..))))))).))))))))).)))))))........

Structure
-aauguug       c         g       ua       c  c    a 
        uguuugc uggcucccu caugcca  uaagagg uu ucaa a
        ||||||| ||||||||| |||||||  ||||||| || |||| u
        acGGACG ACUGAGGGA GUGCGgu  auuuucc ag aguu g
cuaauccg       A         A       uc       c  c    g 


Annotation confidence Not enough data
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Genome context
AC233669.2: 28227-28330 [-]

Database links

Mature mtr-miR160f

Accession MIMAT0021268
Description Medicago truncatula mtr-miR160f mature miRNA
Sequence 74 - GCGUGAAGGGAGUCAAGCAGG - 94
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010