miRBase entry: mtr-MIR5272b

Stem-loop mtr-MIR5272b


Accession
MI0018406
Description
Medicago truncatula mtr-MIR5272b precursor miRNA
Gene family
MIPF0001278; MIR5272


Sequence

ugaguugaauguGAAUUGAUUUAUGUUUGGAUACACucaauuaaaacugauuuuuauuaguugauauuguuuggauaguuugaaucaaaauugauuuuaaa
............((((((((((..((((((((.((..((((...(((((((....)))))))...))))..))....))))))))..))))))))))....

Structure
ugaguugaaugu          AU        ---A  Cu    uaa       u 
            GAAUUGAUUU  GUUUGGAU    CA  caau   aacugau u
            ||||||||||  ||||||||    ||  ||||   |||||||  
            uuuaguuaaa  uaaguuug    gu  guua   uugauua u
--------aaau          ac        auag  uu    uag       u 


Annotation confidence Not enough data
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Genome context
chr5: 34748633-34748733 [-]

Database links

Mature mtr-miR5272b

Accession MIMAT0021303
Description Medicago truncatula mtr-miR5272b mature miRNA
Sequence 13 - GAAUUGAUUUAUGUUUGGAUACAC - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010