miRBase entry: mtr-MIR5273

Stem-loop mtr-MIR5273


Accession
MI0018411
Description
Medicago truncatula mtr-MIR5273 precursor miRNA


Sequence

acaugcuuaaaccuucaaagauuauuagaacaccuaaggaauUAGGGGCUGUAGUUUGAGAAGAGGgucuuaagucaa
....((((((((((((..(((((((.((....(((((....)))))..))))))))).....)))))).))))))...

Structure
acau      -      ---aa       u  aaca     g 
    gcuuaa accuuc     agauuau ag    ccuaa g
    |||||| ||||||     ||||||| ||    |||||  
    ugaauu ugGGAG     UUUGAUG UC    GGAUu a
-aac      c      AAGAG       -  --GG     a 


Annotation confidence Not enough data
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Genome context
chr3: 30065315-30065392 [+]

Database links

Mature mtr-miR5273

Accession MIMAT0021308
Description Medicago truncatula mtr-miR5273 mature miRNA
Sequence 43 - UAGGGGCUGUAGUUUGAGAAGAGG - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010