miRBase entry: mtr-MIR5282

Stem-loop mtr-MIR5282


Accession
MI0018429
Description
Medicago truncatula mtr-MIR5282 precursor miRNA


Sequence

aaaauuagggagggaaauuugugacggaaaacauaaaauuccucacaaauuccuuggucgcaaaauuuuguGACGGAAUUAGAGAGGGAUUUCAUguuuucccucacuaaauuucccucacuaauuu
.(((((((.(((((((((((((((.(((((((((.(((((((((.(.((((((...(((((((....))))))))))))).).))))))))).))))))))).)))).))))))))))).)))))))

Structure
a       g           -    c         a         a a      uug       a 
 aaauuag gagggaaauuu guga ggaaaacau aaauuccuc c aauucc   gucgcaa a
 ||||||| ||||||||||| |||| ||||||||| ||||||||| | ||||||   |||||||  
 uuuaauc cucccuuuaaa cacu ccuuuugUA UUUAGGGAG G UUAAGG   CAGuguu u
-       a           u    c         C         A A      ---       u 


Annotation confidence Not enough data
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Genome context
AC145023.4: 4232-4358 [+]

Database links

Mature mtr-miR5282

Accession MIMAT0021326
Description Medicago truncatula mtr-miR5282 mature miRNA
Sequence 72 - GACGGAAUUAGAGAGGGAUUUCAU - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010