Stem-loop mtr-MIR2590h

Accession

MI0018435

Description

Medicago truncatula mtr-MIR2590h precursor miRNA

Gene family

MIPF0000834; MIR2590

Literature search

1 open access papers mention mtr-MIR2590h
(1 sentences)

Sequence

aaauuuuaAGAAUGACAUGGCAGAAUAAUCACccuuaaauuuuaucaagaaauagucaugaaauuaauguuaaccaauaaaaucucagccuugcugaaaaucauagggugguggguguuauguauuuuuuuuuuaugaaagauuaauaaaugagacugaaaucuaaaggugauuauuguaccaugucauucuugaaucuu
....((((((((((((((((.(.((((((((((.(((.(((((.(((.((.....)).)))...........(((.........(((((...))))).........)))....(((.((((.((((..(((((....)))))..)))).)))).)))))))).))).)))))))))).).))))))))))))))))....

Structure

aaau                C G          c   a     aucaagaaauagucaugaaauuaauguuaaccaauaaaaucucagccuugcugaaaaucauaggguggug   g    g    uu     u 
    uuuaAGAAUGACAUGG A AAUAAUCACc uua auuuu                                                                      ggu uuau uauu  uuuuu a
    |||||||||||||||| | |||||||||| ||| |||||                                                                      ||| |||| ||||  |||||  
    aaguucuuacuguacc u uuauuagugg aau uaaag                                                                      uca agua auaa  agaaa u
uucu                a g          a   c     ----------------------------------------------------------------------   g    a    uu     g 

Annotation confidence Not enough data

Genome context

chr3: 26494187-26494386 [-]

Mature mtr-miR2590h

• Accession: MIMAT0021332
• Description: Medicago truncatula mtr-miR2590h mature miRNA
• Sequence: 9 - AGAAUGACAUGGCAGAAUAAUCAC - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010