Stem-loop mtr-MIR2590i

Accession

MI0018436

Description

Medicago truncatula mtr-MIR2590i precursor miRNA

Gene family

MIPF0000834; MIR2590

Literature search

1 open access papers mention mtr-MIR2590i
(1 sentences)

Sequence

ucaagaaaauuucaAGAAUGACAUGGCAGAAUAAUCACccuuagauuuuaucaagaaauagucaugaaauuaauguuaaccaauaaaaucucagccuggccgaaaaucaugggaugguggguguuauguauuuuuuuuuuaugaaagauuaauaaaugagacugaaaucuaaaggugauuauuguaccaugucauucuuaaauuuuucuuau
..(((((((.((.(((((((((((((.(.((((((((((.(((((((((((((.((.....)).)))............(((.....((((((................))))))..)))((.((((.((((..(((((....)))))..)))).)))).)))))))))))).)))))))))).).))))))))))))).)).)))))))..

Structure

uc       u  c             C G          c          ucaagaaauagucaugaaauuaauguuaaccaauaaaaucucagccuggccgaaaaucaugggauggugg  g    g    uu     u 
  aagaaaa uu aAGAAUGACAUGG A AAUAAUCACc uuagauuuua                                                                      gu uuau uauu  uuuuu a
  ||||||| || ||||||||||||| | |||||||||| ||||||||||                                                                      || |||| ||||  |||||  
  uucuuuu aa uucuuacuguacc u uuauuagugg aaucuaaagu                                                                      ca agua auaa  agaaa u
ua       u  a             a g          a          ----------------------------------------------------------------------  g    a    uu     g 

Annotation confidence Not enough data

Genome context

chr8: 29483055-29483266 [-]

Mature mtr-miR2590i

• Accession: MIMAT0021333
• Description: Medicago truncatula mtr-miR2590i mature miRNA
• Sequence: 15 - AGAAUGACAUGGCAGAAUAAUCAC - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010