miRBase entry: mtr-MIR5284b

Stem-loop mtr-MIR5284b


Accession
MI0018439
Description
Medicago truncatula mtr-MIR5284b precursor miRNA
Gene family
MIPF0001277; MIR5284


Sequence

cuguaauuucagauuccuccacuuuugaucccucauuuuacgugccauguaugcagauuuugcugacgugguggaauGAGGGAUCAAAAGUGGAAGAAUCUgaaauua
...(((((((((((((.((((((((((((((((((((((....(((((((..(((.....)))..))))))))))))))))))))))))))))).)))))))))))))

Structure
cug             c                      acgu       au   g 
   uaauuucagauuc uccacuuuugaucccucauuuu    gccaugu  gca a
   ||||||||||||| ||||||||||||||||||||||    |||||||  ||| u
   auuaaagUCUAAG AGGUGAAAACUAGGGAGuaagg    uggugca  cgu u
---             A                      ----       gu   u 


Annotation confidence Not enough data
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Genome context
chr2: 12596465-12596572 [-]

Database links

Mature mtr-miR5284b

Accession MIMAT0021336
Description Medicago truncatula mtr-miR5284b mature miRNA
Sequence 78 - GAGGGAUCAAAAGUGGAAGAAUCU - 101
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010