Stem-loop mtr-MIR5284c

Accession

MI0018440

Description

Medicago truncatula mtr-MIR5284c precursor miRNA

Gene family

MIPF0001277; MIR5284

Sequence

cuuuuggucccuguaauuucagauuccuccacuuuuagucccucauuuuacaugccauguauguagauucggcugaugugguggaauGAGGGACCAAAAGUGGAAGAAUCUgaaauuacagagacaaaauc
......(((.((((((((((((((((.(((((((((.((((((((((((....(((((((..((.......))..))))))))))))))))))).))))))))).)))))))))))))))).)))......

Structure

cuuuug   c                c         a            acau       au  ag 
      guc cuguaauuucagauuc uccacuuuu gucccucauuuu    gccaugu  gu  a
      ||| |||||||||||||||| ||||||||| ||||||||||||    |||||||  ||  u
      cag gacauuaaagUCUAAG AGGUGAAAA CAGGGAGuaagg    uggugua  cg  u
cuaaaa   a                A         C            ----       gu  gc 

Annotation confidence Not enough data

Genome context

chr4: 29918300-29918430 [+]

Mature mtr-miR5284c

• Accession: MIMAT0021337
• Description: Medicago truncatula mtr-miR5284c mature miRNA
• Sequence: 88 - GAGGGACCAAAAGUGGAAGAAUCU - 111
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010