Stem-loop mtr-MIR5285b

Accession

MI0018447

Description

Medicago truncatula mtr-MIR5285b precursor miRNA

Gene family

MIPF0001292; MIR5285

Sequence

gagauUGGGACUUUGGGUAGAAUUAGGCGagagacuuauucuuguaacccauugauaucucuuuuguaaaguu
(((((.....(..((((((((((.((........)).)))))....)))))..)..)))))............

Structure

------------     UGGGA UU     ----     U  GCG 
            gagau     C  UGGGU    AGAAU AG   a
            |||||     |  |||||    ||||| ||    
            cucua     g  accca    ucuua uc   g
uugaaauguuuu     ---ua uu     augu     u  aga 

Annotation confidence Not enough data

Genome context

chr1: 27319213-27319285 [+]

Mature mtr-miR5285b

• Accession: MIMAT0021344
• Description: Medicago truncatula mtr-miR5285b mature miRNA
• Sequence: 6 - UGGGACUUUGGGUAGAAUUAGGCG - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010