miRBase entry: mtr-MIR5288

Stem-loop mtr-MIR5288


Accession
MI0018452
Description
Medicago truncatula mtr-MIR5288 precursor miRNA


Sequence

uuggaagggugucccuaaauuucuucgccguguugauaCAGCAUUGAAGAACAUAGGGAUUAacgaacgug
..(...(...(((((((...(((((((..((((((...)))))))))))))..)))))))...)...)...

Structure
-uu gaa ggu       aau       cc      a 
   g   g   gucccua   uucuucg  guguug  
   |   |   |||||||   |||||||  |||||| u
   c   c   UAGGGAU   AAGAAGU  UACGAC  
gug aag aAU       -AC       --      a 


Annotation confidence Not enough data
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Genome context
chr2: 23588271-23588341 [+]

Database links

Mature mtr-miR5288

Accession MIMAT0021349
Description Medicago truncatula mtr-miR5288 mature miRNA
Sequence 39 - CAGCAUUGAAGAACAUAGGGAUUA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21571671
    Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
    "Devers EA, Branscheid A, May P, Krajinski F"
    "Plant Physiol (2011) 156:1990-2010