Stem-loop mtr-MIR5289a

Accession

MI0018453

Description

Medicago truncatula mtr-MIR5289a precursor miRNA

Gene family

MIPF0001850; MIR5289

Sequence

gguaguuaacugccgaauuauggaaucgguugcaguuaacuaucgaggaaaacuucggcaguaaacuauCGAGGAAAACUGAAAACUUCGGCAguuaacuguc
(((((((((((((((((....(...((((((..((((.(((.((((((....)))))).))).)))).........))))))...))))))))))))))))))

Structure

                 uuau gaa      -------gc    a   a      a 
gguaguuaacugccgaa    g   ucgguu         aguu acu ucgagg a
|||||||||||||||||    |   ||||||         |||| ||| ||||||  
cugucaauugACGGCUU    C   AGUCAA         ucaa uga ggcuuc a
                 ---- AAA      AAGGAGCua    a   c      a 

Annotation confidence Not enough data

Genome context

chr2: 32184953-32185055 [-]

Mature mtr-miR5289a

• Accession: MIMAT0021350
• Description: Medicago truncatula mtr-miR5289a mature miRNA
• Sequence: 70 - CGAGGAAAACUGAAAACUUCGGCA - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010