Stem-loop mtr-MIR5290

Accession

MI0018456

Description

Medicago truncatula mtr-MIR5290 precursor miRNA

Sequence

aaccggaaaaaugggucaagauccucuccauuuauaaauuuuuucauuuguuguAAUUUGGAGAGAGAUAGACACAUAaaauaagug
..(((......)))(((...((((((((((.((((((.............))))))..))))))).))).)))..............

Structure

aaccggaaaaaugg   aag   -       -u      auuuu 
              guc   auc cucucca  uuauaa     u
              |||   ||| |||||||  ||||||     u
              CAG   UAG GAGAGGU  AAuguu     c
gugaauaaaAUACA   --A   A       UU      guuua 

Annotation confidence Not enough data

Genome context

chr5: 2741121-2741207 [+]

Mature mtr-miR5290

• Accession: MIMAT0021353
• Description: Medicago truncatula mtr-miR5290 mature miRNA
• Sequence: 55 - AAUUUGGAGAGAGAUAGACACAUA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010