Stem-loop mtr-MIR5294a

Accession

MI0018463

Description

Medicago truncatula mtr-MIR5294a precursor miRNA

Gene family

MIPF0001303; MIR5294

Sequence

gagagguucaugcccucagccguucagcuauuuaaacgucaucccaucaguuaaauuauucugaauauucugguGCUAAACGGAAUGAGGGUAGUCAUcccucucau
((((((....((((((((.(((((.(((...............(((((((..........))))......))).))).)))))..))))))))......))))))..

Structure

--      --uuca        -g     c   uauuuaaacgucauc   ------    uuaa 
  gagagg      ugcccuca  ccguu agc               cca      ucag    a
  ||||||      ||||||||  ||||| |||               |||      ||||     
  cucucc      AUGGGAGU  GGCAA UCG               ggu      aguc    u
ua      cUACUG        AA     A   --------------u   cuuaua    uuau 

Annotation confidence Not enough data

Genome context

chr2: 680556-680662 [+]

Mature mtr-miR5294a

• Accession: MIMAT0021360
• Description: Medicago truncatula mtr-miR5294a mature miRNA
• Sequence: 75 - GCUAAACGGAAUGAGGGUAGUCAU - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21571671
   Stars and symbiosis: microRNA- and microRNA*-mediated transcript cleavage involved in arbuscular mycorrhizal symbiosis
   "Devers EA, Branscheid A, May P, Krajinski F"
   "Plant Physiol (2011) 156:1990-2010