miRBase entry: rmi-mir-5322

Stem-loop rmi-mir-5322


Accession
MI0018504
Description
Rhipicephalus microplus rmi-mir-5322 precursor miRNA


Sequence

ucauuugccacuuaaggcaccauugaugaauacgugcaagaucagccugcaauucaaggacaucauguucuuucugaauuuUUCUGUAGACUACGCAAUCAUCAGCAAagagcc
.....((((......))))...(((((((...((((......(((.....((((((((((((...))))))...))))))...))).....))))...))))))).........

Structure
ucauuugccacuuaaggcacca       aua    caagau   ccugc      ---      u 
                      uugauga   cgug      cag     aauuca   aggaca  
                      |||||||   ||||      |||     ||||||   |||||| c
                      GACUACU   GCAU      GUC     uuaagu   ucuugu  
-------------ccgagaAAC       AAC    -CAGAU   --UUu      cuu      a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature rmi-miR-5322

Accession MIMAT0021395
Description Rhipicephalus microplus rmi-miR-5322 mature miRNA
Sequence 82 - UUCUGUAGACUACGCAAUCAUCAGCAA - 108
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21699734
    Evolutionary conserved microRNAs are ubiquitously expressed compared to tick-specific miRNAs in the cattle tick Rhipicephalus (Boophilus) microplus
    Barrero RA, Keeble-Gagnère G, Zhang B, Moolhuijzen P, Ikeo K, Tateno Y, Gojobori T, Guerrero FD, Lew-Tabor A, Bellgard M
    BMC Genomics (2011) 12:328