miRBase entry: gma-MIR5377

Stem-loop gma-MIR5377


Accession
MI0018636
Description
Glycine max gma-MIR5377 precursor miRNA
Gene family
MIPF0001515; MIR4352


Sequence

gaccgucuuagaaugcucagcauucugcaaagguucuucaacaaccgucguagaauguugaguuuucuacaucgaucacaaCUGAAGGAUCGAUGUAGAAUGCUgagcauucuaagacgguc
(((((((((((((((((((((((((((((..(((((((((.....((..((((((.........))))))..))........)))))))))..)))))))))))))))))))))))))))))

Structure
                             aa         ---acaac  uc      ugu 
gaccgucuuagaaugcucagcauucugca  gguucuuca        cg  guagaa   u
|||||||||||||||||||||||||||||  |||||||||        ||  ||||||   g
cuggcagaaucuuacgagUCGUAAGAUGU  CUAGGAAGU        gc  caucuu   a
                             AG         Caacacua  ua      uug 


Annotation confidence Not enough data
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Genome context
chr2: 36745810-36745931 [+]

Database links

Mature gma-miR5377

Accession MIMAT0021618
Description Glycine max gma-miR5377 mature miRNA
Sequence 82 - CUGAAGGAUCGAUGUAGAAUGCU - 104
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21663675
    Identification of novel soybean microRNAs involved in abiotic and biotic stresses
    Kulcheski FR, de Oliveira LF, Molina LG, Almerão MP, Rodrigues FA, Marcolino J, Barbosa JF, Stolf-Moreira R, Nepomuceno AL, Marcelino-Guimarães FC, Abdelnoor RV, Nascimento LC, Carazzolle MF, Pereira GA, Margis R
    BMC Genomics (2011) 12:307