Stem-loop aca-mir-5390

Accession

MI0018697

Description

Anolis carolinensis aca-mir-5390 precursor miRNA

Sequence

cuugucguacagguuggaugucccuuauccgaaauaucuguggacgauugugGAAUUCCGGAUAAGAGACGUCcagccugcaccacuuu
...((.((.(((((((((((((.((((((((.(((.(((............)))))).)))))))).))))))))))))).)).))...

Structure

cuu  c  a             c        a   a   gugga 
   gu gu cagguuggauguc cuuauccg aau ucu     c
   || || ||||||||||||| |||||||| ||| |||      
   ca ca guccgacCUGCAG GAAUAGGC UUA AGg     g
uuu  c  c             A        C   -   uguua 

Annotation confidence Not enough data

Genome context

chr1: 90875993-90876081 [+]

Mature aca-miR-5390

• Accession: MIMAT0021688
• Description: Anolis carolinensis aca-miR-5390 mature miRNA
• Sequence: 53 - GAAUUCCGGAUAAGAGACGUC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107