miRBase entry: aca-mir-101-2

Stem-loop aca-mir-101-2


Accession
MI0018713
Description
Anolis carolinensis aca-mir-101-2 precursor miRNA
Gene family
MIPF0000046; mir-101


Sequence

acuguccuuuuUCGGUUAUCAUGGUACCGGUGcuguauaucugaaaggUACAGUACUGUGAUAACUGAagaaugauggugccaucacaaugag
((((((.((((((((((((((((((((..(((((............))))).)))))))))))))))))))).))))))..............

Structure
--------------      c                    CG     guaua 
              acuguc uuuuUCGGUUAUCAUGGUAC  GUGcu     u
              |||||| ||||||||||||||||||||  |||||      
              ugguag aagaAGUCAAUAGUGUCAUG  CAUgg     c
gaguaacacuaccg      u                    -A     aaagu 


Annotation confidence Not enough data
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Genome context
chr2: 52137646-52137738 [+]

Database links

Mature aca-miR-101-3p

Accession MIMAT0021711
Description Anolis carolinensis aca-miR-101-3p mature miRNA
Sequence 49 - UACAGUACUGUGAUAACUGA - 68
Evidence experimental
Illumina [1]

Mature aca-miR-101-2-5p

Accession MIMAT0021712
Description Anolis carolinensis aca-miR-101-2-5p mature miRNA
Sequence 12 - UCGGUUAUCAUGGUACCGGUG - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107