Stem-loop aca-mir-10c

Accession

MI0018718

Description

Anolis carolinensis aca-mir-10c precursor miRNA

Gene family

MIPF0000033; mir-10

Sequence

agucguuuauaugUACCCUGUAGAAUCGAAUUUGUGugagcaccucaaucACAAAUUCGUCUCUAGGGGAguauauggacgaugcagag
.((((((..((((((((((.((((..((((((((((((((...))))..))))))))))..)))).))).)))))))))))))......

Structure

-----a      ua       -   G    AU          --    c 
      gucguu  uaugUAC CCU UAGA  CGAAUUUGUG  ugag  
      ||||||  ||||||| ||| ||||  ||||||||||  |||| a
      uagcag  guauaug GGG AUCU  GCUUAAACAc  acuc  
gagacg      --       A   G    CU          ua    c 

Annotation confidence Not enough data

Genome context

chr2: 71991615-71991703 [-]

Mature aca-miR-10c-5p

• Accession: MIMAT0021721
• Description: Anolis carolinensis aca-miR-10c-5p mature miRNA
• Sequence: 14 - UACCCUGUAGAAUCGAAUUUGUG - 36
• Evidence: experimental ; Illumina [1]

Mature aca-miR-10c-3p

• Accession: MIMAT0021722
• Description: Anolis carolinensis aca-miR-10c-3p mature miRNA
• Sequence: 51 - ACAAAUUCGUCUCUAGGGGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107