miRBase entry: aca-mir-1306

Stem-loop aca-mir-1306


Accession
MI0018732
Description
Anolis carolinensis aca-mir-1306 precursor miRNA
Gene family
MIPF0000531; mir-1306


Sequence

uccaccaccuccccugcaaacguccagugacgcagagguaaUGGACGUUGGCUCUGGUGGUGAuggaca
((((.((((.((...((.((((((((...((......))..)))))))).))...)).)))).))))..

Structure
--    c    u  ccu  a        gug  gc 
  ucca cacc cc   gc aacgucca   ac  a
  |||| |||| ||   || ||||||||   ||   
  aggu GUGG GG   CG UUGCAGGU   ug  g
ac    A    U  UCU  G        -aa  ga 


Annotation confidence Not enough data
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Genome context
GL343364.1: 1070716-1070784 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from aca-mir-1306
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aca-miR-1306

Accession MIMAT0021738
Description Anolis carolinensis aca-miR-1306 mature miRNA
Sequence 42 - UGGACGUUGGCUCUGGUGGUGA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107