Stem-loop aca-mir-130c

Accession

MI0018736

Description

Anolis carolinensis aca-mir-130c precursor miRNA

Gene family

MIPF0000034; mir-130

Sequence

uguugcuguccggagcccuuuuucuguuguacuacuggcaaguaugaguagCAGUGCAAUAUUAAAAGGGCAUuggcuggcaggcua
..((((((.((((.((((((((..(((((((((.(((.((....))..))).)))))))))..)))))))).)))).))))))....

Structure

--ug      u    a        uc         a   -g  a 
    uugcug ccgg gcccuuuu  uguuguacu cug  ca g
    |||||| |||| ||||||||  ||||||||| |||  ||  
    gacggu gguU CGGGAAAA  AUAACGUGA gau  gu u
aucg      c    A        UU         C   ga  a 

Annotation confidence Not enough data

Genome context

GL343282.1: 1201632-1201718 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-130c

Mature aca-miR-130c

• Accession: MIMAT0021744
• Description: Anolis carolinensis aca-miR-130c mature miRNA
• Sequence: 52 - CAGUGCAAUAUUAAAAGGGCAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107