Stem-loop aca-mir-1329

Accession

MI0018738

Description

Anolis carolinensis aca-mir-1329 precursor miRNA

Gene family

MIPF0000635; mir-1329

Sequence

gcaucggacuguaggggUACAGUGAUCAGGUUACGAUGgauuucucuaguaacagCCUCGUAGCUUGAUCACCAUCUcccuaugauucagauu
..((((((.((((((((....(((((((((((((((.((................)))))))))))))))))....)))))))).))).))).

Structure

gc   -   c        UACA               U  auuucuc 
  auc gga uguagggg    GUGAUCAGGUUACGA Gg       u
  ||| ||| ||||||||    ||||||||||||||| ||        
  uag cuu guaucccU    CACUAGUUCGAUGCU CC       a
-u   a   a        CUAC               -  gacaaug 

Annotation confidence Not enough data

Genome context

chr1: 147380630-147380722 [-]

Mature aca-miR-1329-5p

• Accession: MIMAT0021747
• Description: Anolis carolinensis aca-miR-1329-5p mature miRNA
• Sequence: 18 - UACAGUGAUCAGGUUACGAUG - 38
• Evidence: experimental ; Illumina [1]

Mature aca-miR-1329-3p

• Accession: MIMAT0021748
• Description: Anolis carolinensis aca-miR-1329-3p mature miRNA
• Sequence: 56 - CCUCGUAGCUUGAUCACCAUCU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107