Stem-loop aca-mir-135-1

Accession

MI0018741

Description

Anolis carolinensis aca-mir-135-1 precursor miRNA

Gene family

MIPF0000028; mir-135

Sequence

aguaugccccauugucuucUAUGGCUUUUUAUUCCUAUGUGAuuauaucacuaauuucAUAUAGGGAUUGAAGCCAUGUAauacgcuggggauuu
......(((((.(((.((.(((((((((..((((((((((((..............)))))))))))).))))))))).)).))).)))))....

Structure

aguaug     u   c  c         UU            uuauau 
      cccca ugu uu UAUGGCUUU  AUUCCUAUGUGA      c
      ||||| ||| || |||||||||  ||||||||||||       
      ggggu gca aA GUACCGAAG  UAGGGAUAUAcu      a
--uuua     c   u  U         -U            uuaauc 

Annotation confidence Not enough data

Genome context

chr2: 153285340-153285434 [+]

Mature aca-miR-135-1-3p

• Accession: MIMAT0021751
• Description: Anolis carolinensis aca-miR-135-1-3p mature miRNA
• Sequence: 59 - AUAUAGGGAUUGAAGCCAUGUA - 80
• Evidence: experimental ; Illumina [1]

Mature aca-miR-135-5p

• Accession: MIMAT0021750
• Description: Anolis carolinensis aca-miR-135-5p mature miRNA
• Sequence: 20 - UAUGGCUUUUUAUUCCUAUGUGA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107