Stem-loop aca-mir-135-2

Accession

MI0018742

Description

Anolis carolinensis aca-mir-135-2 precursor miRNA

Gene family

MIPF0000028; mir-135

Sequence

uaaauucacucuaguguuuUAUGGCUUUUUAUUCCUAUGUGAuaguaauaaagucucAUGUAGGGAUGGAAGCCAUGAAauacauugugaaaaa
....(((((....((((((((((((((((.((((((((((((.(.(.....).).))))))))))))))))))))))))))))...)))))...

Structure

uaaa     ucua                U            u g a 
    uucac    guguuuUAUGGCUUUU AUUCCUAUGUGA a u a
    |||||    |||||||||||||||| |||||||||||| | | u
    aagug    cauaAAGUACCGAAGG UAGGGAUGUAcu u a a
-aaa     -uua                -            c g a 

Annotation confidence Not enough data

Genome context

chr5: 29776318-29776411 [-]

Mature aca-miR-135-5p

• Accession: MIMAT0021750
• Description: Anolis carolinensis aca-miR-135-5p mature miRNA
• Sequence: 20 - UAUGGCUUUUUAUUCCUAUGUGA - 42
• Evidence: experimental ; Illumina [1]

Mature aca-miR-135-2-3p

• Accession: MIMAT0021752
• Description: Anolis carolinensis aca-miR-135-2-3p mature miRNA
• Sequence: 58 - AUGUAGGGAUGGAAGCCAUGAA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107