Stem-loop aca-mir-145

Accession

MI0018755

Description

Anolis carolinensis aca-mir-145 precursor miRNA

Gene family

MIPF0000079; mir-145

Sequence

uacuguguccucgggGUCCAGUUUUCCCAGGAAUCCCuuagaugauaagaggggGAUUCCUGGAAAUACUGUUCUuggggucauggcucagcaacu
..(((((.((((((((..((((.((.(((((((((((((...........))))))))))))).)).)))).)))))))).)))))..........

Structure

--------ua     u        UC    U  C             agau 
          cugug ccucgggG  CAGU UU CCAGGAAUCCCuu    g
          ||||| ||||||||  |||| || |||||||||||||    a
          gguac gggguUCU  GUCA AA GGUCCUUAGgggg    u
ucaacgacuc     u        -U    U  A             agaa 

Annotation confidence Not enough data

Genome context

chr2: 122657687-122657782 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-145

Mature aca-miR-145-5p

• Accession: MIMAT0021773
• Description: Anolis carolinensis aca-miR-145-5p mature miRNA
• Sequence: 16 - GUCCAGUUUUCCCAGGAAUCCC - 37
• Evidence: experimental ; Illumina [1]

Mature aca-miR-145-3p

• Accession: MIMAT0021774
• Description: Anolis carolinensis aca-miR-145-3p mature miRNA
• Sequence: 55 - GAUUCCUGGAAAUACUGUUCU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107