miRBase entry: aca-mir-153-1

Stem-loop aca-mir-153-1


Accession
MI0018762
Description
Anolis carolinensis aca-mir-153-1 precursor miRNA
Gene family
MIPF0000050; mir-153


Sequence

cuaauuagcgguugccagugucauuuuugugauguugcagcuaguaauauaagccaagUUGCAUAGUCACAAAAGUGAUcauuggaaacugugacucug
.......((((((.(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).)))))).)))))).......

Structure
cuaauua      g      -             gu       -a  aa 
       gcgguu ccagug ucauuuuugugau  ugcagcu  gu  u
       |||||| |||||| |||||||||||||  |||||||  ||  a
       ugucaa gguuac AGUGAAAACACUG  ACGUUga  cg  u
gucucag      a      U             AU       ac  aa 


Annotation confidence Not enough data
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Genome context
chr6: 6762605-6762703 [-]

Database links

Mature aca-miR-153-3p

Accession MIMAT0021786
Description Anolis carolinensis aca-miR-153-3p mature miRNA
Sequence 59 - UUGCAUAGUCACAAAAGUGAU - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107