Stem-loop aca-mir-1677b

Accession

MI0018769

Description

Anolis carolinensis aca-mir-1677b precursor miRNA

Gene family

MIPF0000849; mir-1677

Sequence

cuuagguccugaACCAAAGCCCCUCGAGGACAAUgugagucuuucuauUGACUUCAGUGGGCUUAGGAUcaggcccuuaa
...(((.(((((.((.((((((((.((((.(((((.((.....))))))).)))))).)))))).)).))))).)))...

Structure

cuu   u     A  A      -  C    A     u  g 
   agg ccuga CC AAGCCC CU GAGG CAAUg ga u
   ||| ||||| || |||||| || |||| ||||| || c
   ucc ggacU GG UUCGGG GA CUUC GUuau cu u
aau   c     A  A      U  -    A     -  u 

Annotation confidence Not enough data

Genome context

GL343197.1: 2025968-2026047 [+]

Mature aca-miR-1677b-5p

• Accession: MIMAT0021797
• Description: Anolis carolinensis aca-miR-1677b-5p mature miRNA
• Sequence: 13 - ACCAAAGCCCCUCGAGGACAAU - 34
• Evidence: experimental ; Illumina [1]

Mature aca-miR-1677b-3p

• Accession: MIMAT0021798
• Description: Anolis carolinensis aca-miR-1677b-3p mature miRNA
• Sequence: 49 - UGACUUCAGUGGGCUUAGGAU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107