miRBase entry: aca-mir-182

Stem-loop aca-mir-182


Accession
MI0018780
Description
Anolis carolinensis aca-mir-182 precursor miRNA
Gene family
MIPF0000116; mir-182


Sequence

guuuucuccggcuguuUUUGGCAAUGGUAGAACUCACAcuggugagguaucaggauccggUGGUUCUAGACUUGCCAACUacggcccgaggguca
...(((((.((((((..(((((((...((((((...(((((((((....)))....))))))))))))...)))))))..)))))).)))))...

Structure
guu     c      uU       UGG      UCA      ----   g 
   uucuc ggcugu  UUGGCAA   UAGAAC   CAcugg    uga g
   ||||| ||||||  |||||||   ||||||   ||||||    |||  
   gggag ccggca  AACCGUU   AUCUUG   GUggcc    acu u
acu     c      UC       CAG      ---      uagg   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature aca-miR-182-5p

Accession MIMAT0021811
Description Anolis carolinensis aca-miR-182-5p mature miRNA
Sequence 17 - UUUGGCAAUGGUAGAACUCACA - 38
Evidence experimental
Illumina [1]

Mature aca-miR-182-3p

Accession MIMAT0021812
Description Anolis carolinensis aca-miR-182-3p mature miRNA
Sequence 61 - UGGUUCUAGACUUGCCAACU - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107