Stem-loop aca-mir-19a

Accession

MI0018797

Description

Anolis carolinensis aca-mir-19a precursor miRNA

Gene family

MIPF0000011; mir-19

Sequence

gcaguccucuguUAGUUUUGCAUAGUUGCACUAcaagaagaauguaguUGUGCAAAUCUAUGCAAAACUGauuguggccuguua
((((.((.(.(((((((((((((((((((((((((.......))))...))))))..))))))))))))))).).)).))))..

Structure

--    u  u u               --      ---    ag 
  gcag cc c guUAGUUUUGCAUAG  UUGCAC   UAca  a
  |||| || | |||||||||||||||  ||||||   ||||  a
  uguc gg g uaGUCAAAACGUAUC  AACGUG   augu  g
au    c  u u               UA      Uug    aa 

Annotation confidence Not enough data

Genome context

GL343584.1: 108526-108609 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from aca-mir-19a

Mature aca-miR-19a-5p

• Accession: MIMAT0021836
• Description: Anolis carolinensis aca-miR-19a-5p mature miRNA
• Sequence: 13 - UAGUUUUGCAUAGUUGCACUA - 33
• Evidence: experimental ; Illumina [1]

Mature aca-miR-19a-3p

• Accession: MIMAT0021837
• Description: Anolis carolinensis aca-miR-19a-3p mature miRNA
• Sequence: 49 - UGUGCAAAUCUAUGCAAAACUG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107