Stem-loop aca-mir-1a-2

Accession

MI0018800

Description

Anolis carolinensis aca-mir-1a-2 precursor miRNA

Gene family

MIPF0000038; mir-1

Literature search

1 open access papers mention aca-mir-1a-2
(6 sentences)

Sequence

uuaccugcuugagugACAUACUUCUUUAUAUGCCCauaugaaccuggcaaacuaUGGAAUGUAAAGAAGUAUGUAUuucagguauggacc
...((((((((((..((((((((((((((((..(((((..............))))).))))))))))))))))..)))))))).))...

Structure

uua  -        ug                GC     ugaacc 
   cc ugcuugag  ACAUACUUCUUUAUAU  CCaua      u
   || ||||||||  ||||||||||||||||  |||||       
   gg auggacuu  UGUAUGAAGAAAUGUA  GGUau      g
cca  u        UA                -A     caaacg 

Annotation confidence Not enough data

Genome context

chr4: 151823196-151823285 [+]

Mature aca-miR-1a-3p

• Accession: MIMAT0021840
• Description: Anolis carolinensis aca-miR-1a-3p mature miRNA
• Sequence: 55 - UGGAAUGUAAAGAAGUAUGUAU - 76
• Evidence: experimental ; Illumina [1]

Mature aca-miR-1a-2-5p

• Accession: MIMAT0021841
• Description: Anolis carolinensis aca-miR-1a-2-5p mature miRNA
• Sequence: 16 - ACAUACUUCUUUAUAUGCCC - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107